In order to acknowledge alarms automatically in the Vijeo Citect dring runtime put all the alarms that need to be automatically acknowledged in the same category. Then use the following Cicode script to acknowledge all the alarms of this category.
You could have this function run every 30seconds for example.
/* Acknowledge all unacknowledged (Type 1) alarms of the specified alarm category. */
FUNCTION AutoAccept(INT Category)
WHILE Current<>-1 DO